Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX548558: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-311241' containing sample 'Rd.3'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.5M spots, 704.1M bases, 334.7Mb downloads

UUID: 35a683ac-2b99-4983-a416-76097338d47d

Design: Illumina sequencing of Staphylococcus aureus Rd.3 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226567 • SRP040795 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus Rd.3

SAMN02391365 • SRS616386 • All experiments • All runs

Organism: Staphylococcus aureus Rd.3

Library:

Name: Pond-311241

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 445654.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:571TD

material_type: DNA:DNA Somatic

product_order: PDO-2395

product_part_number: P-WG-0004

project: G51710

research_project: RP-513

root_sample_id: SM-4PAJM

sample_id: SM-571TD

work_request: 39110

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-17 10:49:08.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.5M spots, 704.1M bases, 334.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1293667	3,485,543	704.1M	334.7Mb	2014-05-21

ID:: 785516

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